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27 pages, 1241 KiB  
Article
Computational Ensemble Gene Co-Expression Networks for the Analysis of Cancer Biomarkers
by Julia Figueroa-Martínez, Dulcenombre M. Saz-Navarro, Aurelio López-Fernández, Domingo S. Rodríguez-Baena and Francisco A. Gómez-Vela
Informatics 2024, 11(2), 14; https://doi.org/10.3390/informatics11020014 - 28 Mar 2024
Abstract
Gene networks have become a powerful tool for the comprehensive examination of gene expression patterns. Thanks to these networks generated by means of inference algorithms, it is possible to study different biological processes and even identify new biomarkers for such diseases. These biomarkers [...] Read more.
Gene networks have become a powerful tool for the comprehensive examination of gene expression patterns. Thanks to these networks generated by means of inference algorithms, it is possible to study different biological processes and even identify new biomarkers for such diseases. These biomarkers are essential for the discovery of new treatments for genetic diseases such as cancer. In this work, we introduce an algorithm for genetic network inference based on an ensemble method that improves the robustness of the results by combining two main steps: first, the evaluation of the relationship between pairs of genes using three different co-expression measures, and, subsequently, a voting strategy. The utility of this approach was demonstrated by applying it to a human dataset encompassing breast and prostate cancer-associated stromal cells. Two gene networks were computed using microarray data, one for breast cancer and one for prostate cancer. The results obtained revealed, on the one hand, distinct stromal cell behaviors in breast and prostate cancer and, on the other hand, a list of potential biomarkers for both diseases. In the case of breast tumor, ST6GAL2, RIPOR3, COL5A1, and DEPDC7 were found, and in the case of prostate tumor, the genes were GATA6-AS1, ARFGEF3, PRR15L, and APBA2. These results demonstrate the usefulness of the ensemble method in the field of biomarker discovery. Full article
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12 pages, 568 KiB  
Article
Paraneoplastic Syndromes in Hepatocellular Carcinoma, Epidemiology, and Survival: A Retrospective Seven Years Study
by Calin Burciu, Roxana Sirli, Renata Bende, Deiana Vuletici, Bogdan Miutescu, Tudor Moga, Felix Bende, Alina Popescu, Ioan Sporea, Oana Koppandi, Eftimie Miutescu, Dana Iovanescu and Mirela Danila
Medicina 2024, 60(4), 552; https://doi.org/10.3390/medicina60040552 - 28 Mar 2024
Abstract
Background and Objectives: Liver cancer poses a significant global health threat, ranking among the top three causes of cancer-related deaths. Patients with hepatocellular carcinoma (HCC) often present with symptoms associated with neoplasms or unusual clinical features such as paraneoplastic syndromes (PNS), including hypoglycemia, [...] Read more.
Background and Objectives: Liver cancer poses a significant global health threat, ranking among the top three causes of cancer-related deaths. Patients with hepatocellular carcinoma (HCC) often present with symptoms associated with neoplasms or unusual clinical features such as paraneoplastic syndromes (PNS), including hypoglycemia, hypercholesterolemia, thrombocytosis, and erythrocytosis. Our study aimed to investigate the prevalence, clinical characteristics, and survival outcomes associated with PNS in HCC patients and assess each PNS’s impact on patient survival. Materials and Methods: We conducted a retrospective analysis of PNS clinical features and survival among consecutive HCC patients diagnosed at our department over seven years, comparing them with HCC patients without PNS. The study involved a retrospective data evaluation from 378 patients diagnosed with HCC between January 2016 and October 2023. Results: We obtained a PNS prevalence of 25.7%, with paraneoplastic hypercholesterolemia at 10.9%, hypoglycemia at 6.9%, erythrocytosis at 4.5%, and thrombocytosis at 3.4%. Patients with PNS tended to be younger and predominantly male. Multivariate analysis revealed a strong correlation between PNS and levels of alpha-fetoprotein and tumor size, with diabetes also showing a significant statistical association (p < 0.05). Subgroup analysis based on specific paraneoplastic syndromes demonstrated shorter survival in patients with PNS, albeit without significant statistical differences, except for hypoglycemia (p < 0.0001). Matched analysis indicated a shorter survival rate for patients with PNS, although no significant statistical differences were observed. Conclusions: PNS are frequently observed in HCC cases and are associated with unfavorable prognoses and decreased survival rates due to their correlation with increased tumor burdens. However, they do not independently predict poor survival. The impact of individual PNS on HCC prognosis varies. Full article
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17 pages, 567 KiB  
Article
GSTM1 and GSTP1 Polymorphisms Affect Outcome in Colorectal Adenocarcinoma
by Milica Stojkovic Lalosevic, Vesna Coric, Tatjana Pekmezovic, Tatjana Simic, Aleksandra Pavlovic Markovic and Marija Pljesa Ercegovac
Medicina 2024, 60(4), 553; https://doi.org/10.3390/medicina60040553 - 28 Mar 2024
Abstract
Background and Objectives: Despite improvements in screening programs, a large number of patients with colorectal cancer (CRC) are diagnosed in an advanced disease stage. Previous investigations imply that glutathione transferases (GSTs) might be associated with the development and progression of CRC. Moreover, [...] Read more.
Background and Objectives: Despite improvements in screening programs, a large number of patients with colorectal cancer (CRC) are diagnosed in an advanced disease stage. Previous investigations imply that glutathione transferases (GSTs) might be associated with the development and progression of CRC. Moreover, the detoxification mechanism of oxaliplatin, which represents the first line of treatment for advanced CRC, is mediated via certain GSTs. The aim of this study was to evaluate the significance of certain GST genetic variants on CRC prognosis and the efficacy of oxaliplatin-based treatment. Materials and Methods: This prospective study included 523 patients diagnosed with CRC in the period between 2014 and 2016, at the Digestive Surgery Clinic, University Clinical Center of Serbia, Belgrade. Patients were followed for a median of 43.47 ± 17.01 months (minimum 1–63 months). Additionally, 109 patients with advanced disease, after surgical treatment, received FOLFOX6 treatment as a first-line therapy between 2014 and 2020. The Kaplan–Meier method was used to analyze cumulative survival, and the Cox proportional hazard regression model was used to study the effects of different GST genotypes on overall survival. Results: Individuals with the GSTM1-null genotype and the GSTP1 IleVal+ValVal (variant) genotype had significantly shorter survival when compared to referent genotypes (GSTM1-active and GSTP1 IleIle) (log-rank: p = 0.001). Moreover, individuals with the GSTM1-null genotype who received 5-FU-based treatment had statistically significantly shorter survival when compared to individuals with the GSTM1-active genotype (log-rank: p = 0.05). Conclusions: Both GSTM1-null and GSTP1 IleVal+ValVal (variant) genotypes are associated with significantly shorter survival in CRC patients. What is more, the GSTM1-null genotype is associated with shorter survival in patients receiving FOLOFOX6 treatment. Full article
11 pages, 421 KiB  
Article
Treatment of Osteoporosis in Men on Androgen Deprivation Therapy in Japan
by Hanako Nishimoto, Atsuyuki Inui, Yutaka Mifune, Kohei Yamaura, Yukari Bando, Yasuyoshi Okamura, Takuto Hara, Tomoaki Terakawa and Ryosuke Kuroda
Medicina 2024, 60(4), 551; https://doi.org/10.3390/medicina60040551 - 28 Mar 2024
Abstract
Background and Objectives: Androgen deprivation therapy (ADT) for prostate cancer has greatly improved treatment outcomes. As patient survival rates have increased, reports of decreased bone density and increased bone fractures as side effects of ADT have emerged. The prevalence of osteoporosis in Japanese [...] Read more.
Background and Objectives: Androgen deprivation therapy (ADT) for prostate cancer has greatly improved treatment outcomes. As patient survival rates have increased, reports of decreased bone density and increased bone fractures as side effects of ADT have emerged. The prevalence of osteoporosis in Japanese men was 4.6%. The purpose of this study was to evaluate the effect of osteoporosis treatment in prostate cancer patients who underwent ADT in Japan. Materials and Methods: The subjects were 33 male patients who had undergone ADT for prostate cancer, who were noted to have decreased bone density. Mean age was 76.2 ± 7.7 years (64–87). Medications included vitamin D in one case, bisphosphonates (BP) in 27 cases, and denosumab in five cases. The evaluation method examined the rate of change in bone mineral density (BMD) before osteoporosis treatment and 1 year after. For comparison, a group without osteoporosis treatment intervention (n = 33) was selected, and matched for prostate cancer treatment and age. The rate of change in trabecular bone score (TBS) was also calculated. Results: The percentage changes in BMD before and 1 year after treatment were as follows: lumbar spine, 7.1 ± 5.8% in the treatment group versus −3.9 ± 4.1% in the no treatment group; femoral neck, 5.5 ± 6.2% in the treatment group versus −0.9 ± 3.9% in the no treatment group; total femur, 6.6 ± 6.4% in the treatment group versus the no treatment group which was −1.7 ± 3.2%. In all cases, there was a clear significant difference (p < 0.01). The percent change in TBS was further calculated in the same manner. There was no significant difference between the two groups: +1.7 ± 3.8% in the treated group versus +0.3 ± 4.1% in the untreated group. Conclusions: Osteoporosis treatment in Japanese patients with prostate cancer on ADT therapy was found to significantly increase BMD compared to the untreated group. BP and denosumab were found to be very effective in increasing BMD. Full article
(This article belongs to the Special Issue Update on Osteoporosis)
11 pages, 613 KiB  
Article
A Comparison of Different Strength Measurement in Taekwondo: Herman Trainer, Manual Tester, and Standing Long Jump
by Ay?e Hazal Boyanm??, ?nci Kesilmi?, Manolya Ak?n, Buse Yilmaz, A?ina Uslular, Yesim Karac Ocal and Hulya Andre
Medicina 2024, 60(4), 550; https://doi.org/10.3390/medicina60040550 - 28 Mar 2024
Abstract
Background and Objective: The accurate prediction of strength development relies on identifying the most appropriate measurement methods. This study compared diverse strength measurement techniques to assess their effectiveness in predicting strength development. Participants were taekwondo athletes competing at the red–black belt level [...] Read more.
Background and Objective: The accurate prediction of strength development relies on identifying the most appropriate measurement methods. This study compared diverse strength measurement techniques to assess their effectiveness in predicting strength development. Participants were taekwondo athletes competing at the red–black belt level or above. Methods: Technical striking forces (palding, dollyeo chagi, dwit chagi, and yeop chagi) were measured using a Herman Digital Trainer fixed to a striking stand. Quadriceps and hamstring strength were assessed with a Lafayette force measuring device. Explosive leg strength was evaluated through a standing long jump test, normalized for leg length. The Pearson correlation coefficient was used to examine relationships between measurement methods. Results: The standing long jump test showed no significant correlation with other strength assessments. A moderate positive correlation was found between Herman digital trainer measurements and Lafayette digital hand-held dynamometer results. A high positive correlation (r = 0.736, p < 0.001) emerged between hamstring strength and palding chagi technical strike force results. Technical strike kicks showed a significant positive correlation with each other and, also, a right foot–left foot correlation was observed. Conclusions: It was concluded that the standing long jump test, which was shown as one of the explosive leg strength measurement methods in field studies as an alternative to laboratory tests, did not correlate with other strength tests; therefore, this test is weak and insufficient to predict strength skills in taekwondo. In addition, this study showed that the hamstring muscle was more predictive in the measurement of technical strength. In future studies, it might be more useful to measure hamstring muscle strength or technical kick strength instead of a standing long jump field test. Full article
14 pages, 7898 KiB  
Review
In-Stent Restenosis Overview: From Intravascular Imaging to Optimal Percutaneous Coronary Intervention Management
by Neda Shafiabadi Hassani, Lucas Carlini Ogliari, Pedro Rafael Vieira de Oliveira Salerno, Gabriel Tensol Rodrigues Pereira, Marcelo Harada Ribeiro and Luis Augusto Palma Dallan
Medicina 2024, 60(4), 549; https://doi.org/10.3390/medicina60040549 - 28 Mar 2024
Abstract
Despite ongoing progress in stent technology and deployment techniques, in-stent restenosis (ISR) still remains a major issue following percutaneous coronary intervention (PCI) and accounts for 10.6% of all interventions in the United States. With the continuous rise in ISR risk factors such as [...] Read more.
Despite ongoing progress in stent technology and deployment techniques, in-stent restenosis (ISR) still remains a major issue following percutaneous coronary intervention (PCI) and accounts for 10.6% of all interventions in the United States. With the continuous rise in ISR risk factors such as obesity and diabetes, along with an increase in the treatment of complex lesions with high-risk percutaneous coronary intervention (CHIP), a substantial growth in ISR burden is expected. This review aims to provide insight into the mechanisms, classification, and management of ISR, with a focus on exploring innovative approaches to tackle this complication comprehensively, along with a special section addressing the approach to complex calcified lesions. Full article
(This article belongs to the Special Issue Cutting-Edge Research in Percutaneous Coronary Intervention)
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11 pages, 1385 KiB  
Review
Successful Needle Aspiration of a Traumatic Pneumothorax: A Case Report and Literature Review
by Giuseppe Bettoni, Silvia Gheda, Michele Altomare, Stefano Piero Bernardo Cioffi, Davide Ferrazzi, Michela Cazzaniga, Luca Bonacchini, Stefania Cimbanassi and Paolo Aseni
Medicina 2024, 60(4), 548; https://doi.org/10.3390/medicina60040548 - 28 Mar 2024
Abstract
Traumatic pneumothorax (PTX) occurs in up to 50% of patients with severe polytrauma and chest injuries. Patients with a traumatic PTX with clinical signs of tension physiology and hemodynamic instability are typically treated with an urgent decompressive thoracostomy, tube thoracostomy, or needle decompression. [...] Read more.
Traumatic pneumothorax (PTX) occurs in up to 50% of patients with severe polytrauma and chest injuries. Patients with a traumatic PTX with clinical signs of tension physiology and hemodynamic instability are typically treated with an urgent decompressive thoracostomy, tube thoracostomy, or needle decompression. There is recent evidence that non-breathless patients with a hemodynamically stable traumatic PTX can be managed conservatively through observation or a percutaneous pigtail catheter. We present here a 52-year-old woman who presented to the emergency department with a 55 mm traumatic PTX. Following aspiration of 1500 mL of air, a clinical improvement was immediately observed, allowing the patient to be discharged shortly thereafter. In hemodynamically stable patients with a post-traumatic PTX, without specific risk factors or oxygen desaturation, observation or simple needle aspiration can be a reasonable approach. Although the recent medical literature supports conservative management of small traumatic PTXs, guidelines are lacking for hemodynamically stable patients with a significantly large PTX. This case report documents our successful experience with needle aspiration in such a setting of large traumatic PTX. We aimed in this article to review the available literature on needle aspiration and conservative treatment of traumatic pneumothorax. A total of 12 studies were selected out of 190 articles on traumatic PTX where conservative treatment and chest tube decompression were compared. Our case report offers a novel contribution by illustrating the successful resolution of a sizable pneumothorax through needle aspiration, suggesting that even a large PTX in a hemodynamically stable patient, without other risk conditions, can be successfully treated conservatively with simple needle aspiration in order to avoid tube thoracostomy complications. Full article
(This article belongs to the Section Emergency Medicine)
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11 pages, 532 KiB  
Article
Quality of Life after Treatment for Pelvic Organ Prolapse in Real-World Study: Recommendations, Vaginal Pessary, and Surgery
by Dominyka Man?inskien?, Migl? Mik?nait?, Mark Barakat, Justina Ka?erauskien?, Dalia Regina Railait?, Laima Maleckien?, Arnoldas Bartusevi?ius and Egl? Bartusevi?ien?
Medicina 2024, 60(4), 547; https://doi.org/10.3390/medicina60040547 - 28 Mar 2024
Abstract
Background and Objectives: Pelvic organ prolapse (POP) is a common condition in women, with its prevalence increasing with age, and can significantly impact the quality of life (QOL) of many individuals. The objective of this study was to assess the overall improvement, quality [...] Read more.
Background and Objectives: Pelvic organ prolapse (POP) is a common condition in women, with its prevalence increasing with age, and can significantly impact the quality of life (QOL) of many individuals. The objective of this study was to assess the overall improvement, quality of life, and continuation of primary treatment for POP over a 24-month period in a real-world setting. Materials and Methods: This is a prospective, observational, follow-up study of women with symptomatic POP who, as a primary treatment, opted for recommendations (lifestyle changes and pelvic floor muscle training), pessary therapy, or surgery. The primary outcome measure was a subjective improvement at the 24-month follow-up, measured with the Patient Global Impression of Improvement (PGI-I) scale. Secondary outcome measures were the continuation rate of the primary treatment method, reason for discontinuation, and the quality of life evaluated with the P-QoL questionnaire. Results: We included 137 women, with 45 women (32.8%) in the recommendations group, 39 (28.5%) in the pessary group, and 53 women (38.7%) in the surgery group. After 24 months, surgery, in comparison with pessary treatment and recommendations, resulted in significantly more women reporting a subjective improvement: 89.6%, 66.7%, and 22.9% (p < 0.001), respectively. Overall, 52% of women from the recommendations group and 36.4% from the pessary group switched to another treatment or discontinued the primary treatment within 24 months. However, women who continued the primary treatment, pessary use, and surgery showed similar subjective improvements (90.5% and 89.6%, respectively) and quality-of-life improvement. Conclusions: The chance of significant improvement was higher following surgery. However, after 24 months, both vaginal pessaries and surgery showed an important quality-of life improvement and can be proposed as primary treatment methods for pelvic organ prolapse. Full article
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19 pages, 13616 KiB  
Article
Synthetic-to-Real Composite Semantic Segmentation in Additive Manufacturing
by Aliaksei Petsiuk, Harnoor Singh, Himanshu Dadhwal and Joshua M. Pearce
J. Manuf. Mater. Process. 2024, 8(2), 66; https://doi.org/10.3390/jmmp8020066 - 28 Mar 2024
Abstract
The application of computer vision and machine learning methods for semantic segmentation of the structural elements of 3D-printed products in the field of additive manufacturing (AM) can improve real-time failure analysis systems and potentially reduce the number of defects by providing additional tools [...] Read more.
The application of computer vision and machine learning methods for semantic segmentation of the structural elements of 3D-printed products in the field of additive manufacturing (AM) can improve real-time failure analysis systems and potentially reduce the number of defects by providing additional tools for in situ corrections. This work demonstrates the possibilities of using physics-based rendering for labeled image dataset generation, as well as image-to-image style transfer capabilities to improve the accuracy of real image segmentation for AM systems. Multi-class semantic segmentation experiments were carried out based on the U-Net model and the cycle generative adversarial network. The test results demonstrated the capacity of this method to detect such structural elements of 3D-printed parts as a top (last printed) layer, infill, shell, and support. A basis for further segmentation system enhancement by utilizing image-to-image style transfer and domain adaptation technologies was also considered. The results indicate that using style transfer as a precursor to domain adaptation can improve real 3D printing image segmentation in situations where a model trained on synthetic data is the only tool available. The mean intersection over union (mIoU) scores for synthetic test datasets included 94.90% for the entire 3D-printed part, 73.33% for the top layer, 78.93% for the infill, 55.31% for the shell, and 69.45% for supports. Full article
(This article belongs to the Special Issue Smart and Advanced Manufacturing)
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20 pages, 2374 KiB  
Article
Comprehensive Empirical Modeling of Shear Strength Prediction in Reinforced Concrete Deep Beams
by Eyad K. Sayhood, Nisreen S. Mohammed, Salam J. Hilo and Salih S. Salih
Infrastructures 2024, 9(4), 67; https://doi.org/10.3390/infrastructures9040067 - 28 Mar 2024
Abstract
This paper presents a thorough investigation into the shear strength capacity of reinforced concrete deep beams, with a focus on improving predictive accuracy beyond existing code provisions. Analyzing 198 deep beams from 15 investigations, this study considers parameters such as the concrete compressive [...] Read more.
This paper presents a thorough investigation into the shear strength capacity of reinforced concrete deep beams, with a focus on improving predictive accuracy beyond existing code provisions. Analyzing 198 deep beams from 15 investigations, this study considers parameters such as the concrete compressive strength (f′c), the shear span-to-effective depth ratio (av/d), and reinforcement ratios (ps, pv, and ph). Introducing a novel predictive model, this study conducts a rigorous evaluation using a nonlinear regression analysis and statistical metrics (MAE, RMSE, and R2). The proposed model demonstrates a significant reduction in the coefficient of variation (CV) to 27.08%, surpassing existing codes’ limitations. Comparative analyses highlight the model’s robustness, revealing an improved convergence of data points and minimal sensitivity to variations in key parameters. The findings suggest that the proposed model offers enhanced predictive accuracy across diverse scenarios, making it a valuable tool for structural engineers. This research contributes to advancing the understanding of shear strength in reinforced concrete deep beams, offering a reliable and versatile predictive model with implications for refining design methodologies and enhancing safety with the efficiency of structural systems. Full article
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14 pages, 377 KiB  
Review
The Relationship between Posture and Muscle Tensive Dysphonia in Teachers: A Systematic Scoping Review
by Roberta Franzone, Luca Petrigna, Daniele Signorelli and Giuseppe Musumeci
J. Funct. Morphol. Kinesiol. 2024, 9(2), 60; https://doi.org/10.3390/jfmk9020060 - 28 Mar 2024
Abstract
Teachers usually present work-related pain such as neck pain. Their posture could be the cause of these problems; indeed, it is often a sway-back posture. Furthermore, teachers can also experience problems with their voice such as dysphonia, specifically muscle tension dysphonia (MTD). This [...] Read more.
Teachers usually present work-related pain such as neck pain. Their posture could be the cause of these problems; indeed, it is often a sway-back posture. Furthermore, teachers can also experience problems with their voice such as dysphonia, specifically muscle tension dysphonia (MTD). This scoping review aims to find the correlation between teachers’ posture and MTD. It also studies how a posture-based treatment can influence this disorder. Randomized controlled trials, controlled clinical trials, prospective cohort studies, and cross-sectional studies that considered the relationship between posture and MTD and that included teachers in their sample. The search led to an initial number of 396 articles; after the screening process, a final number of eight articles were included. A total of 303 patients were analyzed and all showed altered alignment of the head around the cervical spine with hypertonus of the cricothyroid, suprahyoid, and sternocleidomastoid muscles. Although MTD is a disorder with a multifactorial etiology, the articles revealed a correlation between posture and MTD related to a forward protraction of the cervical spine with a hypertonus of the laryngeal and hyoid musculature. This study also detected that an intervention in posture could reduce vocal disorders. Full article
(This article belongs to the Section Functional Anatomy and Musculoskeletal System)
48 pages, 9825 KiB  
Article
Dichichthyidae, a New Family of Deepwater Sharks (Carcharhiniformes) from the Indo–West Pacific, with Description of a New Species
by William T. White, Andrew L. Stewart, Helen L. O’Neill and Gavin J. P. Naylor
Fishes 2024, 9(4), 121; https://doi.org/10.3390/fishes9040121 - 28 Mar 2024
Abstract
The genus Dichichthys was resurrected for five species previously allocated to the genus Parmaturus in the family Pentanchidae. Supraorbital crests on the chondrocranium distinguish Dichichthys from Parmaturus and other members of the family Pentanchidae. A new family, Dichichthyidae, has been proposed to contain [...] Read more.
The genus Dichichthys was resurrected for five species previously allocated to the genus Parmaturus in the family Pentanchidae. Supraorbital crests on the chondrocranium distinguish Dichichthys from Parmaturus and other members of the family Pentanchidae. A new family, Dichichthyidae, has been proposed to contain Dichichthys. The sequence of the NADH2 mitochondrial gene confirms the placement of Dichichthys outside of the Pentanchidae family, as well as separate from the Atelomycteridae and Scyliorhinidae families. Dichichthys albimarginatus was described using a holotype collected off the coast of New Caledonia. A second juvenile specimen collected off the coast of Papua New Guinea was tentatively assigned as D. cf. albimarginatus. Dichichthys bigus is known from the holotype collected in the Coral Sea off the coast of Queensland, Australia. A new, parasite-afflicted underwater observation was reported further north of Queensland. The type species Dichichthys melanobranchus, previously only known from juvenile specimens, was redescribed based on adult specimens. Dichichthys nigripalatum is known from the holotype collected off Sumbawa, Indonesia, and a tentatively identified photo record from West Java. Dichichthys satoi n. sp. is described from the West Norfolk Ridge and off the North Island of New Zealand. Members of the genus Dichichthys have unique curved egg cases which have pliable ridges made up of numerous fibres and long coiled tendrils on the posterior end. Full article
(This article belongs to the Section Taxonomy, Evolution, and Biogeography)
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24 pages, 6864 KiB  
Article
Evaluation of the Impact of Climate Change on the Water Balance of the Mixteco River Basin with the SWAT Model
by Gerardo Colín-García, Enrique Palacios-Vélez, Adolfo López-Pérez, Martín Alejandro Bola?os-González, Héctor Flores-Magdaleno, Roberto Ascencio-Hernández and Enrique Inoscencio Canales-Islas
Hydrology 2024, 11(4), 45; https://doi.org/10.3390/hydrology11040045 - 28 Mar 2024
Abstract
Assessing the impact of climate change is essential for developing water resource management plans, especially in areas facing severe issues regarding ecosystem service degradation. This study assessed the effects of climate change on the hydrological balance using the SWAT (Soil and Water Assessment [...] Read more.
Assessing the impact of climate change is essential for developing water resource management plans, especially in areas facing severe issues regarding ecosystem service degradation. This study assessed the effects of climate change on the hydrological balance using the SWAT (Soil and Water Assessment Tool) hydrological model in the Mixteco River Basin (MRB), Oaxaca, Mexico. Temperature and precipitation were predicted with the projections of global climate models (GCMs) from the Coupled Model Intercomparison Project Phase 6 (CMIP6); the bias was corrected using CMhyd software, and then the best performing GCM was selected for use in the SWAT model. According to the GCM MPI-ESM1-2-LR, precipitation might decrease by between 83.71 mm and 225.83 mm, while temperature might increase by between 2.57 °C and 4.77 °C, causing a greater atmospheric evaporation demand that might modify the hydrological balance of the MRB. Water yield might decrease by 47.40% and 61.01% under the climate scenarios SP245 and SSP585, respectively. Therefore, adaptation and mitigation measures are needed to offset the adverse impact of climate change in the MRB. Full article
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28 pages, 1309 KiB  
Article
In Vitro Human Dermal Absorption Studies on Pesticides in Complex Mixtures: Investigation of Guidance Criteria and Possible Impact Parameters
by Christina Pieper, Nadine Engel, Korinna Wend, Carsten Kneuer and Sabine Martin
Toxics 2024, 12(4), 248; https://doi.org/10.3390/toxics12040248 - 28 Mar 2024
Abstract
Pesticides must not pose unacceptable risks to human health, so risk assessments are conducted before products are authorised. Dermal exposure is often the main route of intake, so estimating realistic and trustworthy dermal absorption values is crucial for risk assessment. Although there are [...] Read more.
Pesticides must not pose unacceptable risks to human health, so risk assessments are conducted before products are authorised. Dermal exposure is often the main route of intake, so estimating realistic and trustworthy dermal absorption values is crucial for risk assessment. Although there are agreed test guidelines for in vitro dermal absorption studies, not every product is tested due to cost reasons. The present dataset consists of 945 individual in vitro experiments on the dermal absorption of human skin with 179 active substances of pesticides in 353 different mixtures, including concentrates and dilutions. The dataset was evaluated to identify the possible impacts of experimental conditions and physico-chemical properties on dermal absorption. The dataset was also analysed to assess the appropriateness of the pro rata correction for untested dilutions, and the set concentration cut-off to decide on the dilution status for choosing a default value on dermal absorption. The study found that the implementation of specific guidelines improved the harmonisation of study conduct, with support for approaches such as pro rata correction and default values. Further analysis of the specific co-formulants may identify influencing factors that may be more important than the experimental variables. Full article
(This article belongs to the Special Issue Pesticide Risk Assessment, Emerging and Re-Emerging Problems)
17 pages, 1255 KiB  
Article
Supercritical CO2 Treatment to Modify Techno-Functional Properties of Proteins Extracted from Tomato Seeds
by Paola Mateo-Roque, Jocksan I. Morales-Camacho, Guadalupe Janet Jara-Romero, Flor de Fátima Rosas-Cárdenas, Luis Huerta-González and Silvia Luna-Suárez
Foods 2024, 13(7), 1045; https://doi.org/10.3390/foods13071045 - 28 Mar 2024
Abstract
Tomato seeds are a rich source of protein that can be utilized for various industrial food purposes. This study delves into the effects of using supercritical CO2 (scCO2) on the structure and techno-functional properties of proteins extracted from defatted tomato [...] Read more.
Tomato seeds are a rich source of protein that can be utilized for various industrial food purposes. This study delves into the effects of using supercritical CO2 (scCO2) on the structure and techno-functional properties of proteins extracted from defatted tomato seeds. The defatted meal was obtained using hexane (TSMH) and scCO2 (TSMC), and proteins were extracted using water (PEWH and PEWC) and saline solution (PESH and PESC). The results showed that scCO2 treatment significantly improved the techno-functional properties of protein extracts, such as oil-holding capacity and foaming capacity (especially for PEWC). Moreover, emulsifying capacity and stability were enhanced for PEWC and PESC, ranging between 4.8 and 46.7% and 11.3 and 96.3%, respectively. This was made possible by the changes in helix structure content induced by scCO2 treatment, which increased for PEWC (5.2%) and decreased for PESC (8.0%). Additionally, 2D electrophoresis revealed that scCO2 hydrolyzed alkaline proteins in the extracts. These findings demonstrate the potential of scCO2 treatment in producing modified proteins for food applications. Full article
15 pages, 2187 KiB  
Article
Effect of Photodynamic Therapy with the Photosensitizer Methylene Blue on Cerebral Endotheliocytes In Vitro
by Vladimir I. Makarov, Alexey S. Skobeltsin, Anton S. Averchuk, Arseniy K. Berdnikov, Milana V. Chinenkova, Alla B. Salmina and Victor B. Loschenov
Photonics 2024, 11(4), 316; https://doi.org/10.3390/photonics11040316 - 28 Mar 2024
Abstract
Background: Microvessels in tumor tissue play a crucial role in meeting the metabolic needs of transformed cells, controlling the entry of xenobiotics into tumor tissue, and regulating local inflammation that promotes metastasis. Methylene blue has photosensitizing properties and can also affect dysfunctional mitochondria. [...] Read more.
Background: Microvessels in tumor tissue play a crucial role in meeting the metabolic needs of transformed cells, controlling the entry of xenobiotics into tumor tissue, and regulating local inflammation that promotes metastasis. Methylene blue has photosensitizing properties and can also affect dysfunctional mitochondria. Methods: The study was performed on the primary culture of CECs. The cells underwent photodynamic treatment through 660 nm laser irradiation at a power density of 300 mW/cm2. The MTT, TMRE, and TUNEL assays were used to assess the survival, redox metabolism, mitochondrial activity, and apoptosis of CECs. Additionally, the metabolic activity of cells was evaluated using FLIM by measuring the fluorescence lifetime of NADH and FAD. Results: When CECs were incubated with MB, there was an increase in mitochondrial activity that was dependent on the concentration of MB. Additionally, mitochondrial activity increased when the CECs were exposed to 660 nm laser irradiation at an energy dose of up to 5 J/cm2. Following PDT, a slight shift towards oxidative phosphorylation was observed. Conclusions: In vitro application of MB accumulation or laser irradiation causes a shift in the redox status of CECs towards increased reducing activity, without causing any cell damage. However, the combined action of PS and laser radiation has the opposite effect on the redox status of cells, resulting in an increase in the oxidized form of FAD. Full article
(This article belongs to the Special Issue Phototheranostics: Science and Applications)
16 pages, 1596 KiB  
Article
Differential Analysis of Pomelo Peel Fermentation by Cordyceps militaris Based on Untargeted Metabolomics
by Yannan Xiang, Siyi Tian, Xinyu Luo, Chenggang Cai, Yaowen Du, Hailong Yang and Haiyan Gao
Processes 2024, 12(4), 687; https://doi.org/10.3390/pr12040687 - 28 Mar 2024
Abstract
The content of differentially abundant metabolites in the fermentation broth of grapefruit peels fermented by Cordyceps militaris at different fermentation times was analyzed via LC‒MS/MS. Small molecule metabolites and differential metabolic pathways were analyzed via multivariate analysis and Kyoto Encyclopedia of Genes and [...] Read more.
The content of differentially abundant metabolites in the fermentation broth of grapefruit peels fermented by Cordyceps militaris at different fermentation times was analyzed via LC‒MS/MS. Small molecule metabolites and differential metabolic pathways were analyzed via multivariate analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment. A total of 423 metabolites were identified at 0, 2, 6, and 10 days after fermentation. Among them, 169 metabolites showed differential abundance, with significant differences observed between the fermentation liquids of every two experimental groups, and the metabolite composition in the fermentation liquid changed over the fermentation time. In summary, the upregulation and downregulation of metabolites in cancer metabolic pathways collectively promote the remodeling of cancer cell metabolism, facilitating increased glycolysis, alterations in TCA cycle flux, and enhanced biosynthesis of the macromolecules required for rapid proliferation and survival. This study provides new perspectives on the development of high-value-added agricultural and forestry byproducts and the development and research of functional foods. Full article
(This article belongs to the Section Food Process Engineering)
22 pages, 1870 KiB  
Article
Numerical Study of Cavitation Characteristics through Butterfly Valve under Different Regulation Conditions
by Guang Zhang, Runhua Hu, Dapeng Yin, Desheng Chen, Haolin Zhou and Zhe Lin
Processes 2024, 12(4), 686; https://doi.org/10.3390/pr12040686 - 28 Mar 2024
Abstract
Butterfly valves are widely used in the pipeline transportation industry due to their safety and reliability, as well as their low manufacturing and operation costs. Cavitation is a common phenomenon in the butterfly valve that can lead to serious damage to a valve’s [...] Read more.
Butterfly valves are widely used in the pipeline transportation industry due to their safety and reliability, as well as their low manufacturing and operation costs. Cavitation is a common phenomenon in the butterfly valve that can lead to serious damage to a valve’s components. Therefore, it is important to investigate the generation and evolution of cavitation in butterfly valves. In this study, LES and the Zwart model were used as the turbulence and cavitation models, respectively, to simulate cavitation through a butterfly valve. The influence of the valve opening degree and inlet flow velocity on dynamic cavitation through the butterfly valve were studied. Furthermore, the cavitated flow field was examined, along with the performance coefficients of the butterfly valve. With the increase in the incoming flow velocity, the high-speed jet zone over a large-range and low-pressure zone appeared inside the downstream of butterfly valve, which affected its stability and the cavitation generation through the valve. Furthermore, the flow coefficient decreased with the increase in vapor volume. In addition, the results indicated that cavitation was more easily induced for smaller valve opening degrees, and the interaction between cavitation and solid walls was stronger. Due to the existence of cavitation, the flow characteristics of butterfly valves are seriously affected. Full article
(This article belongs to the Section Process Control and Monitoring)
12 pages, 1169 KiB  
Article
The Optimization of Nickel-Rich Cathode-Material Production on a Pilot Plant Scale
by Agus Purwanto, Muhammad Nur Ikhsanudin, Putri Putih Puspa Asri, Afifah Salma Giasari, Miftakhul Hakam, Cornelius Satria Yudha, Hendri Widiyandari, Endah Retno Dyartanti, Arif Jumari and Adrian Nur
Processes 2024, 12(4), 685; https://doi.org/10.3390/pr12040685 - 28 Mar 2024
Abstract
Lithium-ion batteries (LIBs) remain the cornerstone of EV technology due to their exceptional energy density. The selection of cathode materials is a decisive factor in LIB technology, profoundly influencing performance, energy density, and lifespan. Among these materials, nickel-rich NCM cathodes have gained significant [...] Read more.
Lithium-ion batteries (LIBs) remain the cornerstone of EV technology due to their exceptional energy density. The selection of cathode materials is a decisive factor in LIB technology, profoundly influencing performance, energy density, and lifespan. Among these materials, nickel-rich NCM cathodes have gained significant attention due to their high specific capacity and cost-effectiveness, making them a preferred choice for EV energy storage. However, the transition from the laboratory-scale to industrial-scale production of NMC-811 cathode material presents challenges, particularly in optimizing the oxidation process of Ni2+ ions. This paper addresses the challenges of transitioning NMC-811 cathode material production from a lab scale to a pilot scale, with its high nickel content requiring specialized oxidation processes. The important point emphasized in this transition process is how to produce cathode materials on a pilot scale, but show results equivalent to the laboratory scale. Several optimization variations are carried out, namely, the optimization of the heating rate and the calcination and sintering temperatures, as well as oxygen variations. These two aspects are important for large-scale production. This paper discusses strategies for successful pilot-scale production, laying the foundation for industrial-scale manufacturing. Additionally, NMC-811 cathodes are incorporated into 18650 cylindrical cells, advancing the adoption of high-performance cathode materials. Full article
(This article belongs to the Section Chemical Processes and Systems)
26 pages, 1863 KiB  
Review
Exploring Safety of Machineries and Training: An Overview of Current Literature Applied to Manufacturing Environments
by Maria Elena Del Giudice, Mahnaz Sharafkhani, Mario Di Nardo, Teresa Murino and Maria Chiara Leva
Processes 2024, 12(4), 684; https://doi.org/10.3390/pr12040684 - 28 Mar 2024
Abstract
A machine is described as an assembly that has a drive system installed or is planned to have a drive system installed and that is constituted of linked elements or components, at least one of which moves, that are connected for a particular [...] Read more.
A machine is described as an assembly that has a drive system installed or is planned to have a drive system installed and that is constituted of linked elements or components, at least one of which moves, that are connected for a particular application (ISO12100). Different types of risks are present in machines, and exposure to them can cause harm or even death. When risk has been adequately reduced, machinery safety considers a machine’s ability to complete its intended duty throughout its life cycle. A literature review was carried out using “safety of machinery” as a keyword, which produced an analysis of 29 papers published from 2008 to 2024. The papers were examined through bibliometric analysis of the year of publication, country, citation statistics, and study of the keywords. These studies were classified into accident analysis papers, papers focused on the normative, papers that addressed risk assessment tools, and papers that conducted quantitative research. In addition, a more in-depth analysis of the articles associated with the keywords with the highest number of occurrences was carried out. Lastly, studies with quantitative analyses were analysed to identify new possible aspects that it is necessary to investigate. Full article
(This article belongs to the Special Issue Risk Assessment and Safety Management in the Manufacturing Process)
30 pages, 2155 KiB  
Review
Generation Mechanism of Hydroxyl Free Radicals in Micro–Nanobubbles Water and Its Prospect in Drinking Water
by Tianzhi Wang, Ci Yang, Peizhe Sun, Mingna Wang, Fawei Lin, Manuel Fiallos and Soon-Thiam Khu
Processes 2024, 12(4), 683; https://doi.org/10.3390/pr12040683 - 28 Mar 2024
Abstract
Micro–nanobubbles (MNBs) can generate ·OH in situ, which provides a new idea for the safe and efficient removal of pollutants in water supply systems. However, due to the difficulty in obtaining stable MNBs, the generation efficiency of ·OH is low, and the removal [...] Read more.
Micro–nanobubbles (MNBs) can generate ·OH in situ, which provides a new idea for the safe and efficient removal of pollutants in water supply systems. However, due to the difficulty in obtaining stable MNBs, the generation efficiency of ·OH is low, and the removal efficiency of pollutants cannot be guaranteed. This paper reviews the application research of MNB technology in water security from three aspects: the generation process of MNBs in water, the generation rule of ·OH during MNB collapse, and the control mechanisms of MNBs on pollutants and biofilms. We found that MNB generation methods are divided into chemical and mechanical (about 10 kinds) categories, and the instability of the bubble size restricts the application of MNB technology. The generation of ·OH by MNBs is affected by the pH, gas source, bubble size, temperature, and external stimulation. And the pH and external stimulus have more influence on ·OH generation in situ than the other factors. Adjusting the pH to alkaline or acidic conditions and selecting ozone or oxygen as the gas source can promote ·OH generation. MNB collapse also releases a large amount of energy, during which the temperature and pressure can reach 3000 K and 5 Gpa, respectively, making it efficient to remove ≈90% of pollutants (i.e., trichloroethylene, benzene, and chlorobenzene). The biofilm can also be removed by physical, chemical, and thermal effects. MNB technology also has great application potential in drinking water, which can be applied to improve water quality, optimize household water purifiers, and enhance the taste of bottled water. Under the premise of safety, after letting people of different ages taste water samples, we found that compared with ordinary drinking water, 85.7% of people think MNB water is softer, and 73.3% of people think MNB water is sweeter. This further proves that MNB water has a great prospect in drinking water applications. This review provides innovative theoretical support for solving the problem of drinking water safety. Full article
(This article belongs to the Special Issue Micro–Nano Bubble Technology and Its Applications)
16 pages, 2856 KiB  
Article
Time-Specific Thresholds for Batch Process Monitoring: A Study Based on Two-Dimensional Conditional Variational Auto-Encoder
by Jinlin Zhu, Zhong Liu, Xuyang Lou, Furong Gao and Zheng Zhang
Processes 2024, 12(4), 682; https://doi.org/10.3390/pr12040682 - 28 Mar 2024
Abstract
This paper studies the use of varying threshold in the statistical process control (SPC) of batch processes. The motivation is driven by how when multiple phases are implicated in each repetition, the distributions of the features behind vary with phases or even the [...] Read more.
This paper studies the use of varying threshold in the statistical process control (SPC) of batch processes. The motivation is driven by how when multiple phases are implicated in each repetition, the distributions of the features behind vary with phases or even the time; thus, it is inconsistent to uniformly bound them by an invariant threshold. In this paper, we paved a new path for learning and monitoring batch processes based on an efficient framework integrating a model termed conditional dynamic variational auto-encoder (CDVAE). Phase indicators are first used to split the data and are then separated, serving as an extra input for the model in order to alleviate the learning complexity. Dissimilar to the routine using features across all timescales, only features relevant to local timestamps are aggregated for threshold calculation, producing a varying threshold that is more specific for the process variations occurring among the timeline. Leveraged upon this idea, a fault detection panel is devised, and a deep reconstruction-based contribution diagram is illustrated for locating the faulty variables. Finally, the comparative results from two case studies highlight the superiority in both detection accuracy and diagnostic performance. Full article
14 pages, 491 KiB  
Article
Energy Efficiency in Heat Pumps and Solar Collectors: Case of Slovakia
by Stefan Kuzevic, Marcela Tausova, Katarina Culkova, Lucia Domaracka and Danylo Shyp
Processes 2024, 12(4), 681; https://doi.org/10.3390/pr12040681 - 28 Mar 2024
Abstract
Sustainable energy presently represents the energy of the future, which should be based on the application respecting the importance of energy priorities, increasing regional self-sufficiency, regional control of energy, and regulation of resource use. In the area of energy supply, the use of [...] Read more.
Sustainable energy presently represents the energy of the future, which should be based on the application respecting the importance of energy priorities, increasing regional self-sufficiency, regional control of energy, and regulation of resource use. In the area of energy supply, the use of RES has been increasingly popular, mainly due to the instability in the energy market and the political situation worldwide. Paper’s ambition is to evaluate the efficiency of the selected RES use in the specific conditions of Slovakia, with the aim to achieve the EU targets. This is important due to the increasing use of RES in Slovakia. The objective of this paper is achieved through an analysis of the energy profit of the RES system, comparing the costs of the proposed solutions. The evaluation is carried out by calculating the energy and economic efficiency of three possible buildings used in the research. Using the data obtained, the results show the most suitable alternative for each building. The resulting findings provide a valuable insight for governments in identifying the best projects for RES use. The result will be methodology creation as a base for local administration and communities to elaborate plans with a goal to extend RES use. Full article
(This article belongs to the Special Issue Sustainable Development Processes for Renewable Energy Technology II)

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